The detailed information of tRNA gene sequence


Sequence ID>WENV170554756
Genome IDCXWK01087801
Search identical group
Phylum/Class[CXWK] wastewater metagenome; activated sludge
Species
Start position on genome 3999
End posion on genome 3905
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgggcacttC
tRNA gene sequence 
GGAGAGTTGGCAGAGTCTGGCTGATTGCACCTGTCTCGAAAACAGGAGTGGGACCACCAT
CCCACCGGGGGTTCGGATCCCTCACTCTCCGCCC
Downstream region at tRNA end position 
tatcgcggct
Secondary structure (Cloverleaf model)
>WENV170554756	Ser	CGA
                   C      GCCC tatcgcggct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     G
    C T G A        G      | + | | |     G
  T         G A C G       G G G G G     C
  G         + | | |                 T T
  G         T T G C
    C T G A        A     AGTGGGACCACCATCCCACC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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