The detailed information of tRNA gene sequence


Sequence ID>WENV170554862
Genome IDCXWK01090064
Search identical group
Phylum/Class[CXWK] wastewater metagenome; activated sludge
Species
Start position on genome 1291
End posion on genome 1202
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
catgagtaaa
tRNA gene sequence 
GGAGCCGTGTCAGAGTGGTCTAACGTACCTCTTTGCTAAAGAGGCAGGGTGTAAAAGCCC
TCGCTGGTTCGAATCCAGCCGGCTCCGCCA
Downstream region at tRNA end position 
gaaaaagcca
Secondary structure (Cloverleaf model)
>WENV170554862	Ser	GCT
                   a      GCCA gaaaaagcca
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C G A C C     A
      T G A        G      | | | | |     G
    G       G A C T       G C T G G     C
    G           |                   T T
    T       A C G T
      C T A        A     CAGGGTGTAAAAGCCCTC
                    C - G
                    C - G
                    T - A
                    C - G
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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