The detailed information of tRNA gene sequence


Sequence ID>WENV170554937
Genome IDCXWK01091674
Search identical group
Phylum/Class[CXWK] wastewater metagenome; activated sludge
Species
Start position on genome 1009
End posion on genome 917
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gacccaaaca
tRNA gene sequence 
GGAGGGCTGTCAGAGATGGATTATTGAATTGGTCTTGAAAACCAACGGTCGATGAAAGTT
GATCCCAGGGTTCGAATCCCTGGCCCTCTTCAA
Downstream region at tRNA end position 
aacatttcat
Secondary structure (Cloverleaf model)
>WENV170554937	Ser	TGA
                   a      TCAA aacatttcat
                     G + T
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T A
                    T     G T C C C     A
    T A G A        G      | | | | |     G
  G         G A C T       C A G G G     C
  G         + | | |                 T T
  A         T T G A
    T T A          A     CGGTCGATGAAAGTTGATCC
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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