The detailed information of tRNA gene sequence


Sequence ID>WENV170555016
Genome IDCXWK01093578
Search identical group
Phylum/Class[CXWK] wastewater metagenome; activated sludge
Species
Start position on genome 1092
End posion on genome 1005
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgcacctcca
tRNA gene sequence 
GGAGAGGTCGCATAGTGGCCTAGTGCGTCGGTCTTGAAAACCGATGTCCTTCACCGGACC
GTGAGTTCGAATCTCACCCTCTCCGCCA
Downstream region at tRNA end position 
tatatggcaa
Secondary structure (Cloverleaf model)
>WENV170555016	Ser	TGA
                   a      GCCA tatatggcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C T C     A
      T G A        C      | | | | |     G
    G       T A C G       G T G A G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TGTCCTTCACCGGACC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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