The detailed information of tRNA gene sequence


Sequence ID>WENV170555027
Genome IDCXWK01094027
Search identical group
Phylum/Class[CXWK] wastewater metagenome; activated sludge
Species
Start position on genome 409
End posion on genome 498
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gattgtttaa
tRNA gene sequence 
GGAGAGATGCGTGAGCGGTTGAAACGGCAACCCTGGAAAGGTTGTATGTCCGAAACTGCA
TCGGGAGTTCGAATCTCCCTCTCTCCGCAA
Downstream region at tRNA end position 
tcggcccacc
Secondary structure (Cloverleaf model)
>WENV170555027	Ser	GGA
                   a      GCAA tcggcccacc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C T C     A
      C G A        G      | | | | |     G
    G       G T G C       G G G A G     C
    G         | | |                 T T
    T       A A C G
      T G A        G     TATGTCCGAAACTGCATC
                    C - G
                    A - T
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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