The detailed information of tRNA gene sequence


Sequence ID>WENV170555246
Genome IDCXWK01099210
Search identical group
Phylum/Class[CXWK] wastewater metagenome; activated sludge
Species
Start position on genome 1718
End posion on genome 1810
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccaactgcgt
tRNA gene sequence 
GGAGAGTTGGCAGAGTGGCCGATAGCAACTGGTTGCTAACCAGTAGAGCGTGCTAGTACC
ACGCTCCATGGGTTCGAATCCCATACTCTCCTCat
Downstream region at tRNA end position 
cgaggtcagc
Secondary structure (Cloverleaf model)
>WENV170555246	Ser	GCT
                   t      TCat cgaggtcagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     T A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       A T G G G     C
    G       +   | |                 T T
    C       T A G C
      C G A        A     AGAGCGTGCTAGTACCACGCTCC
                    A - T
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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