The detailed information of tRNA gene sequence


Sequence ID>WENV170555272
Genome IDCXWK01100125
Search identical group
Phylum/Class[CXWK] wastewater metagenome; activated sludge
Species
Start position on genome 1271
End posion on genome 1198
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtaaactcaa
tRNA gene sequence 
AGGGGTGTCGTTCAACGGTAGGACAACGGTTTCCAAAACCGTGAATCAGGGTTCGATTCC
TTGCGCCCCTGCCA
Downstream region at tRNA end position 
taaaggtcat
Secondary structure (Cloverleaf model)
>WENV170555272	Trp	CCA
                   a      GCCA taaaggtcat
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T T
                    T     G T T C C     A
        A A        C      | | + | |     G
      C     C T T G       C A G G G     C
      G     | + | |                 T T
      G     G G A C
        T A        A     GAAT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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