The detailed information of tRNA gene sequence


Sequence ID>WENV170555392
Genome IDCXWL01000457
Search identical group
Phylum/Class[CXWL] groundwater metagenome; biofilm material
Species
Start position on genome 17171
End posion on genome 17076
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ccttgccagc
tRNA gene sequence 
GGGAGTGGTTAGGTCCCGGTGGGCTTCCTGGTCTTCAAAACCTGTGGCGGGTCGCGTTGC
GGGCCGCGGTGGGTTCGACTCCCATCCATTCCCGCCt
Downstream region at tRNA end position 
atcatctgga
Secondary structure (Cloverleaf model)
>WENV170555392	SeC(p)	TCA
                   c      GCCt atcatctgga
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     T - A
                     G - C
                     G - C          T C
                    T     T A C C C     A
      C C C        T      + | | | |     G
    G       T G G A       G T G G G     C
    G       + | + |                 T T
    T       G C T T
      G G          C     TGGCGGGTCGCGTTGCGGGCCGCG
                    C - G
                    T   T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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