The detailed information of tRNA gene sequence


Sequence ID>WENV170555465
Genome IDCXWL01000672
Search identical group
Phylum/Class[CXWL] groundwater metagenome; biofilm material
Species
Start position on genome 101553
End posion on genome 101456
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
agctaaacga
tRNA gene sequence 
GGAAGTGAGCCGGGTCTGGTGACCTGCACGGCCTTCAAAGCCGCTGACGTCCGGGGTCTC
CCCGGACAGGTGGGTTCGATTCCCACGCACTTCCGCCA
Downstream region at tRNA end position 
aaggtccatc
Secondary structure (Cloverleaf model)
>WENV170555465	SeC	TCA
                   a      GCCA aaggtccatc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     A   G          T T
                    G     C A C C C     A
      T C T        C      | | | | |     G
    G       G G G C       G T G G G     C
    G       | | + |                 T T
    T       C C T G
      G A          C     TGACGTCCGGGGTCTCCCCGGACAG
                    A   C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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