The detailed information of tRNA gene sequence


Sequence ID>WENV170555766
Genome IDCXWL01002141
Search identical group
Phylum/Class[CXWL] groundwater metagenome; biofilm material
Species
Start position on genome 276063
End posion on genome 276160
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
cgaattctcg
tRNA gene sequence 
GGAGGCGCGGCTTGTCCGGTGATGGGCGCGGTCTTCAAAACCGTTGTGAGGGCGCGAGAG
CGTACTCAGGTGGGTTCGACTCCCACACGCCTCCGCCA
Downstream region at tRNA end position 
aattagtgaa
Secondary structure (Cloverleaf model)
>WENV170555766	SeC(p)	TCA
                   g      GCCA aattagtgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     C   A          T C
                    G     C A C C C     A
      C C T        G      | | | | |     G
    G       G T T C       G T G G G     C
    G       + + + |                 T T
    T       T G G G
      G A          C     TGTGAGGGCGCGAGAGCGTACTCAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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