The detailed information of tRNA gene sequence


Sequence ID>WENV170555921
Genome IDCXWL01003153
Search identical group
Phylum/Class[CXWL] groundwater metagenome; biofilm material
Species
Start position on genome 26645
End posion on genome 26734
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cagccgctcc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGTCAGTCTCGAAAACTGGAGTACTCGCAAGGGTA
TCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gcatgcccgt
Secondary structure (Cloverleaf model)
>WENV170555921	Ser	CGA
                   c      GCCA gcatgcccgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     AGTACTCGCAAGGGTATC
                    T + G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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