The detailed information of tRNA gene sequence


Sequence ID>WENV170556250
Genome IDCXWL01006195
Search identical group
Phylum/Class[CXWL] groundwater metagenome; biofilm material
Species
Start position on genome 22008
End posion on genome 21909
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ctgcagccct
tRNA gene sequence 
GGAAGCGCCCGGGGGCTGGTGTCCCTTGCGGTCTTCAAAACCGTTGTCCGGCGCCGGTTC
CGGCGTCGGGGGTGGGTTCGATTCCCATGCGCTTCCGCCA
Downstream region at tRNA end position 
cctgcccgcg
Secondary structure (Cloverleaf model)
>WENV170556250	SeC(p)	TCA
                   t      GCCA cctgcccgcg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     C - G          T T
                    C     T A C C C     A
      T C G        C      + | | | |     G
    G       G G G G       G T G G G     C
    G       | | | +                 T T
    T       C C C T
      G T          T     TGTCCGGCGCCGGTTCCGGCGTCGGGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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