The detailed information of tRNA gene sequence


Sequence ID>WENV170556728
Genome IDCXWL01012813
Search identical group
Phylum/Class[CXWL] groundwater metagenome; biofilm material
Species
Start position on genome 1461
End posion on genome 1550
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgcctcccgc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGATTGCGGCAGACTCGAAATCTGTTGTGCCCGCAAGGGTA
CCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gaccgtcgtg
Secondary structure (Cloverleaf model)
>WENV170556728	Ser	CGA
                   c      GCCA gaccgtcgtg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGTGCCCGCAAGGGTACC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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