The detailed information of tRNA gene sequence


Sequence ID>WENV170556964
Genome IDCXWL01016739
Search identical group
Phylum/Class[CXWL] groundwater metagenome; biofilm material
Species
Start position on genome 1511
End posion on genome 1603
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
cgtttgctct
tRNA gene sequence 
GGGGGCGGTTGGCGTCCGGTGGCGTCCGCGGTCTTCAAAACCGTTGTCGGGCCGGTCAGG
TCCGGGGTGGGTTCGACTCCCATCCGCTCCCGCag
Downstream region at tRNA end position 
tctacacctg
Secondary structure (Cloverleaf model)
>WENV170556964	SeC(p)	TCA
                   t      GCag tctacacctg
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C          T C
                    T     T A C C C     A
      C C T        T      + | | | |     G
    G       G C G G       G T G G G     C
    G       | | + |                 T T
    T       C G T C
      G G          C     TGTCGGGCCGGTCAGGTCCGGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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