The detailed information of tRNA gene sequence


Sequence ID>WENV170557831
Genome IDCXWL01039265
Search identical group
Phylum/Class[CXWL] groundwater metagenome; biofilm material
Species
Start position on genome 2098
End posion on genome 2187
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tccccgctcc
tRNA gene sequence 
GGACAGGTGGCCGAGTGGCTGAAGGCGCACGCTTGGAAAGCGTGTTTAGGTGAAAGCCTA
ACGAGGGTTCGAATCCCTCTCTGTCCGCCA
Downstream region at tRNA end position 
gcggcgttat
Secondary structure (Cloverleaf model)
>WENV170557831	Ser	GGA
                   c      GCCA gcggcgttat
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TTTAGGTGAAAGCCTAAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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