The detailed information of tRNA gene sequence


Sequence ID>WENV170558023
Genome IDCXWL01046796
Search identical group
Phylum/Class[CXWL] groundwater metagenome; biofilm material
Species
Start position on genome 2249
End posion on genome 2160
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccgcccgaat
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTCGAATGTACCTGACTCGAAATCAGGCGTGCGTGTAAGCGCA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
aaaaaggacc
Secondary structure (Cloverleaf model)
>WENV170558023	Ser	CGA
                   t      GCCA aaaaaggacc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G         | | +                 T T
    T       A T G T
      C G A        A     CGTGCGTGTAAGCGCACC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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