The detailed information of tRNA gene sequence


Sequence ID>WENV170558245
Genome IDCXWL01059188
Search identical group
Phylum/Class[CXWL] groundwater metagenome; biofilm material
Species
Start position on genome 3401
End posion on genome 3489
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgacttgtaT
tRNA gene sequence 
GGAGAGGTGCCCGAGCGGCTGATGGGGCTGGTTTCGAAAACCAGTGTGCGGGAAACTGTA
CCGGGGGTTCGAATCCCCCCCTCTCCGGtc
Downstream region at tRNA end position 
tgttgtgagg
Secondary structure (Cloverleaf model)
>WENV170558245	Ser	CGA
                   T      GGtc tgttgtgagg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G C C C       G G G G G     C
    G       + | | |                 T T
    C       T G G G
      T G A        G     TGTGCGGGAAACTGTACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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