The detailed information of tRNA gene sequence


Sequence ID>WENV170558871
Genome IDCXWL01096950
Search identical group
Phylum/Class[CXWL] groundwater metagenome; biofilm material
Species
Start position on genome 1309
End posion on genome 1214
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gcccgcgcac
tRNA gene sequence 
GGAGAAGGATGGGGCCCGGTGGCCCCACCGGTCTTCAAAACCGCGCTGTCCCTCCCAGTG
GGGGACGGAAGGTTCGACTCCTTCCCTTCTCCGCCA
Downstream region at tRNA end position 
gactcgaggt
Secondary structure (Cloverleaf model)
>WENV170558871	SeC(p)	TCA
                   c      GCCA gactcgaggt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C          T C
                    A     C T T C C     A
      C C C        T      | | | | |     G
    G       G G G G       G A A G G     C
    G       | | | |                 T T
    T       C C C C
      G G          A     GCTGTCCCTCCCAGTGGGGGACG
                    C   C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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