The detailed information of tRNA gene sequence


Sequence ID>WENV170559704
Genome IDCXWL01139961
Search identical group
Phylum/Class[CXWL] groundwater metagenome; biofilm material
Species
Start position on genome 603
End posion on genome 508
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ctgcgtccaT
tRNA gene sequence 
GGGAGGGGATCGTCCCTGGTGGGGCGGCTGGGCTTCAAACCCAGTGGGTGGCGCCAGTCG
TCGCCGGGAAGGTTCGACTCCTTCCCCCTTCCGCC
Downstream region at tRNA end position 
gtcgagcggg
Secondary structure (Cloverleaf model)
>WENV170559704	SeC	TCA
                   T      CGCC gtcgagcggg
                     G - C
                     G + T
                     G + T
                     A   C
                     G - C
                     G - C
                     G - C          T C
                    G     C T T C C     A
      C C C        A      | | | | |     G
    T       T G C T       G A A G G     C
    G       +     +                 T T
    G       G G C G
      T G G        G     TGGGTGGCGCCAGTCGTCGCCGG
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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