The detailed information of tRNA gene sequence


Sequence ID>WENV170560673
Genome IDCZCA01000048
Search identical group
Phylum/Class[CZCA] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 66323
End posion on genome 66230
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acagccctgc
tRNA gene sequence 
GGAGATGTGTCCGAGCTGGCTGAAGGAGCACGATTGGAAATCGTGTGTATGTGCAAAACG
CGTACCCTGGGTTCGAATCCCAGCATCTCCGCCA
Downstream region at tRNA end position 
cttttacggt
Secondary structure (Cloverleaf model)
>WENV170560673	Ser	GGA
                   c      GCCA cttttacggt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     G A C C C     A
    T C G A        G      | | | | |     G
  G         G C C T       C T G G G     C
  G           | | |                 T T
  C         A G G A
    T G A          G     TGTATGTGCAAAACGCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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