The detailed information of tRNA gene sequence


Sequence ID>WENV170560757
Genome IDCZCA01000405
Search identical group
Phylum/Class[CZCA] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 53612
End posion on genome 53687
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcttcgacat
tRNA gene sequence 
GGAGACGTGGTGTAGCGGTTAGCATAACGGCCTGTCAAGCCGTAGGTCGCGGGTTCAAAT
CCCGTCGTCTCCGCCA
Downstream region at tRNA end position 
aaatgtaaca
Secondary structure (Cloverleaf model)
>WENV170560757	Asp	GTC
                   t      GCCA aaatgtaaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G C C C     A
      C G A        G      + | | | |     A
    G       T G T G       G C G G G     C
    G       + | | +                 T T
    T       G C A T
      T A          A     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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