The detailed information of tRNA gene sequence


Sequence ID>WENV170560859
Genome IDCZCA01000826
Search identical group
Phylum/Class[CZCA] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 36576
End posion on genome 36669
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
attatttttt
tRNA gene sequence 
GGAGAGATGTCCGAGCTGGCCGAAGGAGCATGATTGGAAATCATGTGAACGGTTTTTAGC
CGTTCCTGGGGTTCGAATCCCCATCTCTCCGCCA
Downstream region at tRNA end position 
aaaaatccgt
Secondary structure (Cloverleaf model)
>WENV170560859	Ser	GGA
                   t      GCCA aaaaatccgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     A C C C C     A
    T C G A        G      | | | | |     G
  G         G C C T       T G G G G     C
  G           | | |                 T T
  C         A G G A
    C G A          G     TGAACGGTTTTTAGCCGTTCC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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