The detailed information of tRNA gene sequence


Sequence ID>WENV170561021
Genome IDCZCA01002086
Search identical group
Phylum/Class[CZCA] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 765
End posion on genome 677
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcactgaatg
tRNA gene sequence 
GGAGGGGTGTCCGAGCGGTTTATGGAGCCGGTCTTGAAAACCGGTGTCTCAGAAATGGGC
CGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
ttgctcgtag
Secondary structure (Cloverleaf model)
>WENV170561021	Ser	TGA
                   g      GCCA ttgctcgtag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G       + | | |                 T T
    T       T G G A
      T T A        G     TGTCTCAGAAATGGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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