The detailed information of tRNA gene sequence


Sequence ID>WENV170561195
Genome IDCZCA01004171
Search identical group
Phylum/Class[CZCA] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 1600
End posion on genome 1509
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tcaataatta
tRNA gene sequence 
GGAGAGATGCCAGAGCGGTCGAATGGGGCGGTCTCGAAAACCGTTGTCCGTTATTCGACG
GACCGAGGGTTCGAATCCCTCTCTCTCCGCTA
Downstream region at tRNA end position 
aatggttatt
Secondary structure (Cloverleaf model)
>WENV170561195	Ser	CGA
                   a      GCTA aatggttatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G A C C       G A G G G     C
    G         | | |                 T T
    T       A T G G
      C G A        G     TGTCCGTTATTCGACGGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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