The detailed information of tRNA gene sequence


Sequence ID>WENV170561284
Genome IDCZCA01005787
Search identical group
Phylum/Class[CZCA] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 847
End posion on genome 937
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
caatatgttt
tRNA gene sequence 
GGAGAGGTACCGAAGCGGTCATAACGGGGCGGTCTTGAAAACCGTTAGAGTCTTACGGCT
CACAAGGGTTCGAATCCCTTCCTCTCCGCCA
Downstream region at tRNA end position 
atttttttat
Secondary structure (Cloverleaf model)
>WENV170561284	Ser	TGA
                   t      GCCA atttttttat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
    G C G A        A      | | | | |     G
  G         A G C C       A A G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          G     TAGAGTCTTACGGCTCAC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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