The detailed information of tRNA gene sequence


Sequence ID>WENV170561287
Genome IDCZCA01005787
Search identical group
Phylum/Class[CZCA] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 1124
End posion on genome 1199
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
caccagattt
tRNA gene sequence 
AGGGATTTAGTTCAGTTGGTAGAACGTCGGTCTCCAAAACCGGATGTCACGGGTTCGAGT
CCTGTAATCCCTGCCA
Downstream region at tRNA end position 
tatatggacc
Secondary structure (Cloverleaf model)
>WENV170561287	Trp	CCA
                   t      GCCA tatatggacc
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     T - A          T G
                    T     T G T C C     A
      T G A        A      | | + | |     G
    T       C T T G       A C G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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