The detailed information of tRNA gene sequence


Sequence ID>WENV170561322
Genome IDCZCA01005951
Search identical group
Phylum/Class[CZCA] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 2476
End posion on genome 2388
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttttatatat
tRNA gene sequence 
GGAAGGTTGGCCGAGTTGGTCGAAGGCAGTGGATTGCTAATTCATAGGACTTTTAAGTTC
CGCAGGTTCGAATCCTGCACCTTCCGCCA
Downstream region at tRNA end position 
ttcatttcct
Secondary structure (Cloverleaf model)
>WENV170561322	Ser	GCT
                   t      GCCA ttcatttcct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     C G T C C     A
    T T G A        G      | | | | |     G
  G         G C C G       G C A G G     C
  G           | | |                 T T
  T         A G G C
    C G A          A     AGGACTTTTAAGTTCC
                    G + T
                    T - A
                    G - C
                    G + T
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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