The detailed information of tRNA gene sequence


Sequence ID>WENV170561361
Genome IDCZCA01007171
Search identical group
Phylum/Class[CZCA] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 377
End posion on genome 472
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tttggcacac
tRNA gene sequence 
GGGGGTAGCTAGCGGCCTGGTGGCGCTCCTGGACTTCAAATCCAGCGGTGGACCTGATAA
GTCCACGGTGGGTTCGATTCCCATCTACTCCCGCCA
Downstream region at tRNA end position 
cgcatatatt
Secondary structure (Cloverleaf model)
>WENV170561361	SeC(p)	TCA
                   c      GCCA cgcatatatt
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     A - T
                     G - C          T T
                    C     T A C C C     A
      C C G        T      + | | | |     G
    T       G C G A       G T G G G     C
    G       | | | |                 T T
    G       C G C T
      T G G        C     CGGTGGACCTGATAAGTCCACG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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