The detailed information of tRNA gene sequence


Sequence ID>WENV170561601
Genome IDCZCA01015723
Search identical group
Phylum/Class[CZCA] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 135
End posion on genome 227
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggcatattgG
tRNA gene sequence 
GGAAGGGTGCTTGAGAGGCCGAAAAGAGCCGCCTGCTAAGCGGTTGAGGGTGTTAAAACC
CTCCGAGGGTTCAAATCCCTCCCCTTCCGCCA
Downstream region at tRNA end position 
ttcaaataaa
Secondary structure (Cloverleaf model)
>WENV170561601	Ser	GCT
                   G      GCCA ttcaaataaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     A
    G       G T T C       G A G G G     C
    G         | | |                 T T
    C       A A A G
      C G A        A     TGAGGGTGTTAAAACCCTCC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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