The detailed information of tRNA gene sequence


Sequence ID>WENV170561635
Genome IDCZCA01017978
Search identical group
Phylum/Class[CZCA] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 2773
End posion on genome 2864
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcaatattat
tRNA gene sequence 
GGAGAGATGGCTGAGCTGGTCGAAGGCGCACGACTGGAAATCGTGTATACCCTTTAAAGG
TATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gttttaagca
Secondary structure (Cloverleaf model)
>WENV170561635	Ser	GGA
                   t      GCCA gttttaagca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G T C G       G A G G G     C
  G           + | |                 T T
  T         A G G C
    C G A          G     TATACCCTTTAAAGGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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