The detailed information of tRNA gene sequence


Sequence ID>WENV170561671
Genome IDCZCA01019735
Search identical group
Phylum/Class[CZCA] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 459
End posion on genome 554
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aagcaaatat
tRNA gene sequence 
GGAGAGGTGGCTGAGCTTGGCTGAAGGCGCTCGATTGGAAATCGAGTAGGCGGGCTAAAA
CCTGCCTCGCGGGTTCAAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
ttaaagaatt
Secondary structure (Cloverleaf model)
>WENV170561671	Ser	GGA
                   t      GCCA ttaaagaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    T C G A        G      | | | | |     A
  T         G T C G       G C G G G     C
  G           + | |                 T T
  G         A G G C
    C T G A        G     TAGGCGGGCTAAAACCTGCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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