The detailed information of tRNA gene sequence


Sequence ID>WENV170561744
Genome IDCZCA01025967
Search identical group
Phylum/Class[CZCA] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 93
End posion on genome 187
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
taaactgcgc
tRNA gene sequence 
GGGGGTGGATTGGGCCTGGTGGCCCGCCCGGACTTCAAATCCGGCGGTGGGCATGGACTG
TCCGCGGTGGGTTCGATTCCCACACACTCCCGCCA
Downstream region at tRNA end position 
gaaaccggat
Secondary structure (Cloverleaf model)
>WENV170561744	SeC(p)	TCA
                   c      GCCA gaaaccggat
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C
                     G   A          T T
                    A     C A C C C     A
      T C C        T      | | | | |     G
    G       G G G T       G T G G G     C
    G       | | | +                 T T
    T       C C C G
      G G          C     CGGTGGGCATGGACTGTCCGCG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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