The detailed information of tRNA gene sequence


Sequence ID>WENV170561942
Genome IDCZCB01000409
Search identical group
Phylum/Class[CZCB] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 3181
End posion on genome 3091
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttttcgacct
tRNA gene sequence 
GGAGAGTTCGCCTAGATGGTCGAGGGCGCATGACTGGAAATCATGTATACCCGTAAGGGT
ATCCAGGGTTCGAATCCCTGACTCTCCGCCA
Downstream region at tRNA end position 
tattgtaaaa
Secondary structure (Cloverleaf model)
>WENV170561942	Ser	GGA
                   t      GCCA tattgtaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     G T C C C     A
    T A G A        C      | | | | |     G
  G         T C C G       C A G G G     C
  G         + | | |                 T T
  T         G G G C
    C G A          G     TATACCCGTAAGGGTATC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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