The detailed information of tRNA gene sequence


Sequence ID>WENV170562478
Genome IDCZCB01003078
Search identical group
Phylum/Class[CZCB] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 306
End posion on genome 214
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttcactaact
tRNA gene sequence 
GGAGAAGTACTCAAGATGGTGAAGAGGCGCCCCTGCTAAGGGTGTAGGTCGGGTCACACC
GGCGCGAGGGTTCAAGTCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
taaaaaacat
Secondary structure (Cloverleaf model)
>WENV170562478	Ser	GCT
                   t      GCCA taaaaaacat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C T C C C     A
      A G A        A      | | | | |     A
    T       A C T C       G A G G G     C
    G         | | |                 T T
    G       A G A G
      T G A        G     TAGGTCGGGTCACACCGGCGC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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