The detailed information of tRNA gene sequence


Sequence ID>WENV170562737
Genome IDCZCB01004889
Search identical group
Phylum/Class[CZCB] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 831
End posion on genome 922
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcttaaaaac
tRNA gene sequence 
GGAGAGATGGCCGAGTTTGGTTTAAGGCGCACGACTCGAAATCGTGTGAGGGTTGACCCC
CTCCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
ttttgcacta
Secondary structure (Cloverleaf model)
>WENV170562737	Ser	CGA
                   c      GCCA ttttgcacta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  T         G C C G       G T G G G     C
  G           | | |                 T T
  G         A G G C
    T T T A        G     TGAGGGTTGACCCCCTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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