The detailed information of tRNA gene sequence


Sequence ID>WENV170562747
Genome IDCZCB01004974
Search identical group
Phylum/Class[CZCB] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 1002
End posion on genome 909
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aggttggctt
tRNA gene sequence 
GGAGAGATGGCTGAGTCTGGCTGAAGGCGCTCGCCTGGAAAGCGGGTAGACGGGGATACC
TGTCTCGCGGGTTCAAATCCCGCTCTCTCCGCCA
Downstream region at tRNA end position 
ttttttataa
Secondary structure (Cloverleaf model)
>WENV170562747	Ser	GGA
                   t      GCCA ttttttataa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
    C T G A        G      | | | | |     A
  T         G T C G       G C G G G     C
  G           + | |                 T T
  G         A G G C
    C T G A        G     TAGACGGGGATACCTGTCTC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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