The detailed information of tRNA gene sequence


Sequence ID>WENV170562830
Genome IDCZCB01005791
Search identical group
Phylum/Class[CZCB] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 15435
End posion on genome 15530
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tcttaatgac
tRNA gene sequence 
GGGAATGGCTGAGTCCCGGTGGGCTCCCCGGTCTTCAAAACCGGTGGCGGGCCGTTATGC
GGGCCGCGGTGGGTTCGACCCCCATCCATTCCCGCCt
Downstream region at tRNA end position 
ttttaataac
Secondary structure (Cloverleaf model)
>WENV170562830	SeC(p)	TCA
                   c      GCCt ttttaataac
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T - A
                     G - C
                     G - C          C C
                    C     T A C C C     A
      C C C        T      + | | | |     G
    G       T G A G       G T G G G     C
    G       + | | |                 T T
    T       G C T C
      G G          C     TGGCGGGCCGTTATGCGGGCCGCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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