The detailed information of tRNA gene sequence


Sequence ID>WENV170563080
Genome IDCZCB01009763
Search identical group
Phylum/Class[CZCB] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 1179
End posion on genome 1090
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgtccacttt
tRNA gene sequence 
GGAGGGGTGGCAGAGCGGTTGAATGCGGCAGTCTTGAAAACTGTTGAGGGTGCAAGCCCT
CCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
ctttaactct
Secondary structure (Cloverleaf model)
>WENV170563080	Ser	TGA
                   t      GCCA ctttaactct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     TGAGGGTGCAAGCCCTCC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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