The detailed information of tRNA gene sequence


Sequence ID>WENV170563220
Genome IDCZCB01012168
Search identical group
Phylum/Class[CZCB] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 2169
End posion on genome 2263
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtttgtgtgg
tRNA gene sequence 
GGAGAGATGGCCGAGTAGGTTGAAGGCGATCGCCTGCTAAGCGATTATACGGGCTAATAC
CTGTATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gataaataaa
Secondary structure (Cloverleaf model)
>WENV170563220	Ser	GCT
                   g      GCCA gataaataaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    A T G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  T         A G G C
    T G A          G     TATACGGGCTAATACCTGTATC
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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