The detailed information of tRNA gene sequence


Sequence ID>WENV170563359
Genome IDCZCB01015917
Search identical group
Phylum/Class[CZCB] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 1816
End posion on genome 1729
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gagcgaaact
tRNA gene sequence 
GGAGAGGTGCCAGAGCGGCCGATTGGGGCGGTCTCGAAAACCGTTGTAGTCTTCGGGCTA
CCGTGGGTTCGAATCCCACCCTCTCCGCnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170563359	Ser	CGA
                   t      GCnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G       + | | |                 T T
    C       T T G G
      C G A        G     TGTAGTCTTCGGGCTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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