The detailed information of tRNA gene sequence


Sequence ID>WENV170563688
Genome IDCZCB01025388
Search identical group
Phylum/Class[CZCB] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 2220
End posion on genome 2308
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtctctatac
tRNA gene sequence 
GGAGAGGTATCGAAGTGGTCATAACGGGGCTGACTCGAAATCAGTTTGCGCGCAAGCGCA
CGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170563688	Ser	CGA
                   c      GCCA nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C T       G T G G G     C
  T           | | +                 T T
  C         A C G G
    A T A          G     TTGCGCGCAAGCGCAC
                    G + T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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