The detailed information of tRNA gene sequence


Sequence ID>WENV170563698
Genome IDCZCB01025862
Search identical group
Phylum/Class[CZCB] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 291
End posion on genome 218
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cttgtcaaac
tRNA gene sequence 
AGGGGTATAGTTCAATGGTAGAACAGCGGTCTCCAAAACCGTTAATGAGGGTTCGAATCC
TTCTACCCCTGCCA
Downstream region at tRNA end position 
gatggcgatt
Secondary structure (Cloverleaf model)
>WENV170563698	Trp	CCA
                   c      GCCA gatggcgatt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C T T C C     A
        A A        A      | | + | |     G
      T     C T T G       G A G G G     C
      G     | | | |                 T T
      G     G A A C
        T A        A     TAAT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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