The detailed information of tRNA gene sequence


Sequence ID>WENV170563713
Genome IDCZCB01026175
Search identical group
Phylum/Class[CZCB] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 227
End posion on genome 152
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcgtcaactt
tRNA gene sequence 
AGGGGAGTAGCTCAGTTGGTAGAGCAGCGGTCTCCAAAACCGCGTGCCGCGGGTTCAAGT
CCTGTCTCCCCTGCCA
Downstream region at tRNA end position 
aggtacgaaa
Secondary structure (Cloverleaf model)
>WENV170563713	Trp	CCA
                   t      GCCA aggtacgaaa
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T G T C C     A
      T G A        A      + | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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