The detailed information of tRNA gene sequence


Sequence ID>WENV170563858
Genome IDCZCB01032453
Search identical group
Phylum/Class[CZCB] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 1250
End posion on genome 1160
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcgaatcgat
tRNA gene sequence 
GGAGAGATGGTCGAGCTGGTTTAAGGCACCGGTCTTGAAAACCGGCGTGGGTTTACGCCC
ACCCTGGGTTCGAATCCCAGTCTCTCCGCCA
Downstream region at tRNA end position 
tattttattt
Secondary structure (Cloverleaf model)
>WENV170563858	Ser	TGA
                   t      GCCA tattttattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G A C C C     A
    T C G A        G      | | | | |     G
  G         G C T G       C T G G G     C
  G           | + |                 T T
  T         A G G C
    T T A          A     CGTGGGTTTACGCCCACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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