The detailed information of tRNA gene sequence


Sequence ID>WENV170563859
Genome IDCZCB01032453
Search identical group
Phylum/Class[CZCB] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 1135
End posion on genome 1044
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agttcgatgt
tRNA gene sequence 
GGAGAAGTACTCAAGTAGGTCGAAGAGGCGCCCCTGCTAAGGGTGTAGGTCGTTAATGCG
GCGCGAGGGTTCGAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
caaattgctg
Secondary structure (Cloverleaf model)
>WENV170563859	Ser	GCT
                   t      GCCA caaattgctg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
    A T G A        A      | | | | |     G
  G         A C T C       G A G G G     C
  G           | | |                 T T
  T         A G A G
    C G A          G     TAGGTCGTTAATGCGGCGC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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