The detailed information of tRNA gene sequence


Sequence ID>WENV170563949
Genome IDCZCB01038327
Search identical group
Phylum/Class[CZCB] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 159
End posion on genome 72
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agacaaacaa
tRNA gene sequence 
GGAGAGTTGGCAGAGCGGTTGATTGCGGCGGTCTTGAAAACCGTTTTAGCGAGAGCTAAC
TGGGGTTCGAATCCCTAACTCTCCGCCA
Downstream region at tRNA end position 
aacgaaggtc
Secondary structure (Cloverleaf model)
>WENV170563949	Ser	TGA
                   a      GCCA aacgaaggtc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     A T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       T G G G G     C
    G       + | | |                 T T
    T       T T G C
      T G A        G     TTTAGCGAGAGCTAAC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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