The detailed information of tRNA gene sequence


Sequence ID>WENV170564026
Genome IDCZCB01042725
Search identical group
Phylum/Class[CZCB] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 2579
End posion on genome 2492
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnnntgtgc
tRNA gene sequence 
GGAGGACTGGCCGAGCGGTCGAAGGCGGGTGACTTGAAATCACTTGTGCCGCAAGGCACC
GGGGGTTCAAATCCCTCGTCCTCCGCCA
Downstream region at tRNA end position 
ttttgtaagc
Secondary structure (Cloverleaf model)
>WENV170564026	Ser	TGA
                   c      GCCA ttttgtaagc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     C - G          T A
                    T     C T C C C     A
      C G A        G      | + | | |     A
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGTGCCGCAAGGCACC
                    G + T
                    G - C
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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