The detailed information of tRNA gene sequence


Sequence ID>WENV170564150
Genome IDCZKD01000029
Search identical group
Phylum/Class[CZKD] soil metagenome genome assembly CiPEHR-AK-2010-FBin.3, contig:; soil
Species
Start position on genome 125983
End posion on genome 126080
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gtagcgccac
tRNA gene sequence 
GGAAGCGCATGCGGTCCGGTGATCGTCCCGGTCTTCAAAACCGGCGGGTGGCGGGCAATC
CCGTCACCGGTGGGTTCGACCCCCACTCGCTTCCGCCA
Downstream region at tRNA end position 
tttaaaaccc
Secondary structure (Cloverleaf model)
>WENV170564150	SeC(p)	TCA
                   c      GCCA tttaaaaccc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     C   T          C C
                    A     C A C C C     A
      C C T        T      | | | | |     G
    G       G G C G       G T G G G     C
    G       + | | +                 T T
    T       T C G T
      G A          C     CGGGTGGCGGGCAATCCCGTCACCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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