The detailed information of tRNA gene sequence


Sequence ID>WENV170564318
Genome IDCZKI01000082
Search identical group
Phylum/Class[CZKI] soil metagenomic genome assembly CiPEHR-AK-2010-FBin.1, contig; soil
Species
Start position on genome 74555
End posion on genome 74646
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gccctgaaac
tRNA gene sequence 
GGAGAGATGCCTGAGTGGCCGAAAGGGGCGGTTTGCTAAACCGTTGTACGGGTAAAACCG
TACCGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
tttaacacgc
Secondary structure (Cloverleaf model)
>WENV170564318	Ser	GCT
                   c      GCCA tttaacacgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T C C       G G G G G     C
    G         | | |                 T T
    C       A A G G
      C G A        G     TGTACGGGTAAAACCGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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