The detailed information of tRNA gene sequence


Sequence ID>WENV170564397
Genome IDCZKM01000245
Search identical group
Phylum/Class[CZKM] soil metagenome genome assembly CiPEHR-AK-2010-FBin.17, contig:; soil
Species
Start position on genome 6033
End posion on genome 6125
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcaatgagtt
tRNA gene sequence 
GGAGAGATGGCCGAGTGGCTGAAGGCGGCGGTTTGCTAAACCGTTGTACGGTCAAAAGCC
GTACCGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
ttcttcaagc
Secondary structure (Cloverleaf model)
>WENV170564397	Ser	GCT
                   t      GCCA ttcttcaagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TGTACGGTCAAAAGCCGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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